Genomic Technologies in Improving the Efficiency of Animal Health and Husbandry

Ward M. Ashraf, Elhafi A. Giuma, Ayad M. Magdy, Aswehli A. Abdelatefm, Alkurdi M. Abdulraouf, Elgusbi A. Ghada, Hdud M. Ismail, Jurewicz-Ward Katarzyna

Abstract


One of the reasons for this lag in the practical application of the accumulated technologies seems to be the lack of a concept of successive stages of their application in order to increase efficiency and reduce the time for traditional selection work. The first stage of such a technological chain should be a set of methods that allows selecting and selecting animals with an increased likelihood of the desired manifestation of the characteristics of productivity and adaptive potential in their offspring. In order to forecast productivity at the present time, particularly in dairy cattle breeding, "genomic selection" methods are used when, based on the genomic scanning by mononucleotide substitutions (SNP), groups of polylocus genotypes are combined, combining bulls with high milk productivity of their daughters. Genetic engineering is the name of a group of techniques used to identify, replicate, modify and transfer the genetic material of cells, tissues or complete organisms.

 

Important applications of genetic engineering in animal breeding are: 1) Marker-assisted selection (MAS). The objective of this technology is to increase disease resistance, productivity and product quality in economically important animals by adding information of DNA markers to phenotypes and genealogies for selection decisions. 2) Transgenesis, the direct transfer of specific genes/alleles between individuals, species, or even Kingdoms, in order to change their phenotypic expression in the recipients. Compared to the 'traditional' improvement techniques based on phenotypic information only, these gene-by-gene techniques allow theoretically a more complete management of animal genomes for animal breeding. In spite of high expectations and new technical developments, its actual efficiency is not always high, as they require a thorough knowledge of functional genomics, and pose additional technical, economical and ethical problems. The possible role for cloning adult animals in breeding is also discussed.


Keywords


Biomarkers, Quantitative Trait Genes (QTL), Health, Genomic Selection, Landscape Genomics.

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References


Aibazov, M.M. Modern biotechnological methods and methods of intesification of reproduction of sheep and goats / М.М. Aibazov // Sheep, goats, woolen business. - 2007. - No. 4. - P. 54-56.

Aibazov, M.M. The use of laparoscopy for intrauterine insemination and embryo transplantation

in sheep / M.M. Aibazov // Vestnik of veterinary medicine. - 1998. - № 5. - P. 51.

Aibazov, M.M. Cryopresistance of goat embryos depending on the stage of development / М.М. Aibazov, T. Mamontova // Collected scientific works of the All-Russian Scientific Research Institute of Sheep and Goat Production. - 2019. - T. 3. - No. 6. - P. 14-17.

Aibazov, M.M. Perspective biotechnology of the reproduction of sheep and goats / М.М. Aibazov, Т.V. Mamontova, M.S. Seitov // Collected scientific works of the All-Russian Scientific Research Institute of Sheep and Goat Production. - 2014. - T. 1. - No. 7 (1) .- P. 3-7

Altukhov, Yu.P. Polymorphism of DNA in population genetics. / Yu.P. Altukhov, E.A. Salmenkova // Genetics. - 2018.- P. 38. - No. 9. - P. 1173-1195.

Ambrosyeva, E.D. Biochemical markers in pig production (review). / E.D. Ambrosyeva // Agrarian Russia. - 2002. - No. 5. - P. 19-30.

Aulchenko, Yu.S. Methodological approaches and strategies for mapping genes that control complex human traits. / Yu.S. Aulchenko, TI Aksenovich // Vestnik VOGiS, 2006. - T. 10. - No. 1. - P.189-202.

Bagirov, VA Conservation and rational use of the animal gene pool / VA, Bigirov, Sh.N.-Nasibov, P.M. Klenovitsky, S.A. Lesin, V.A. Voevodin, N.A. Zinoviev, L.K. Ernst, V.V. Kalashnikov, V.A. Soloshenko / Reports of the Russian Academy of Agricultural Sciences. - 2019. - No. 2. - P. 37.

Glazko, V.I. Introduction to DNA technology. /IN AND. Glazko, I.M. Dunin, G.V. Glazko, L.A. Kalashnikova / M .: Rosinformagrotekh, - 2001.- 436 p.

Zinovieva, N. Methods of marker-dependent breeding. N. Zinovieva, E. Gladyr, G. Derzhavin, E. Kunaeva // Livestock breeding in Russia. - 2006. - No. 3. - P. 29-31.

Zubets, M.V. On the possibility of ordering the desired genotype of a descendant by blood groups in an automated analytical mode when selecting couples. / M.V. Zubets, A.G. Kostyuk, V.I. Vlasov, B.E. Podoba // Molekuljarno-genetic markers of animals. Kiev. - 2018. - P. 82 - 83.

Maksimenko, V.F. Genetic-selection aspects of the conservation of the Yaroslavl cattle breed. / VF, McSimenko // Proceedings of the VIZh: Dubrovitsy, - 2005. - P. 134-137.

Mamontova, Т.V. Modern trends in the development of the world and Russian market of biotechnologies in animal husbandry / Т.V., Mamontova, М.М. Aibazov, O. Rusakova // Collected scientific works of the All-Russian Scientific Research Institute of Sheep and Goat Production. - 2014. - T. 2. - No. 7. - P. 292-300.

Marzanov, N.S. Microsatellites and their use to assess the genetic diversity of animals (review of foreign literature). / N.S. Marzanov, M.Yu. Ozerov, M.G. Nasibov, L.K. Marzanova // Agricultural Biology. - 2004. - No. 2. - P. 104-111.

Potokina, E.K. Modern methods of genomic analysis in studies of genetics of quantitative traits in plants. / E.K., Potokin, Yu.V. Chesnokov // Agricultural Biology. - 2005. - No. 3. - C.3-18.

Selionova, M.I. About some results of scientific support of sheep breeding and goat breeding of the Russian Federation / M.I. Selionova, V.A. Bagirov / Sheep, goats, woolen business. - 2014. - № 1. - С. 2-3.

Selionova, M.I. Prospects of using genomic technologies in sheep breeding (analytical review) / M.I. Selionov, M.M. Aibazov, Т.V. Mamontova // Collection of scientific works of the All-Russian Scientific Research Institute of Sheep and Goat Production. - 2019. - T. 3. - No. 7. - P. 107-112.

Serdyuk, G.N. Use of immunogenetic markers in animal breeding / G.N. Serdyuk // Modern methods of genetics and selection in cattle breeding: materials of the international scientific conference, St. Petersburg: VNIIGRZH. - 2007. - P. 240-243.

Serebrovsky, A.S. Genetic analysis. / A.S., Serebrovsky. - Moscow: Science. - 1970.- 342 p.

Smaragdov, M.G. Total genomic selection with the help of SNP as a possible accelerator of traditional selection / M.G. Smaragdov // Genetics. - 2009. - Т. 45. - № 6. - С. 725-728.

Tinaeva, N.A. On the possibility of using polymorphism of blood proteins as an indicator of selection in fur farming / N.A. Tinaeva, L.G. Markovich, V.V. Konkina, E.A. Semikrasova // Vestnik VOGiS - 2019. - T. 11. - No. 1. - P. 122-129.

Schmidt, T.Yu. Possibilities of using microsatellite markers for genetic mapping of loci of economically useful traits (Quantitative Trait Loci - QTL / T.Yu. Schmidt, VG Shevchenko // Questions of general biology in veterinary medicine. - 2002. - P. 176-182.

Georges M., Massey JM Velogenetics, or the synergistic use of marker assisted selection and germ line manipulation // Theriogenology. 1991.-V. 35.-P. 151-159.

Haley CS, Visscher PM Strategies to utilize marker - quantitative trait loci associations // J. Dair. Sci. 1998-V.E. 81, No. 2.-C. 85-97.

Meuwissen THE. Genomic selection: The future of animal breeding // Norwegian University of LifSciences, Box 5003, 1432 As Norway.2007-P. 88-91.

Sax K. The association of size differences with seed-coat pattern and pigmentation in Phaseolus Vulgaris // Genetics. -1923.-V. 8.-P.552-560.

Serebrovsky AS, Wassina ET On the topography of the sex-chromosome in fowis // J. Genet. -1926 V. 17.-P. 211-216 (cited according to [10]).

Glazko VI, Belopukhov S.L. Nanotechnologies and nanomaterials in agriculture. Ed. acad. Russian Academy of Agricultural Sciences Bautin. - M: Publishing house of RGAU-MAAA named after K.A. Timiryazev. - 2018. - 228 pp.

Mechnikov, II Selected Works, Ed. Ph.D. A.E. Gaisinovich - M .: Uchpedgiz. - 1956. - 417 p.

Feder ME, Mitchell-Olds T. Evolutionary and ecological functional genomics // Nat. Rev. Genet. - 2003. - Vol. - P. 651-657.

Hammami H, Rekik B, Bastin C et al. Environmental sensitivity for milk yield in Luxembourg and Tunisian Holsteins by herd management level // J. Dairy Sci. - 2009. - Vol. 92. No. 9. P. 4604-4612.

Hammami H, Rekik B, Soyeurt H et al. Accessing genotype by environment interaction using within and across country test-day random regression sire models // J. Anim. Breed. Genet. - 2009. - Vol. 126. No. 5. - P. 366-377.

Hammami H, Rekik B, Soyeurt H et al. Genotype x environment interaction for milk yield in Holsteins using Luxembourg and Tunisian populations // J. Dairy Sci .. - 2008. - Vol. 91. № 9. - P. 3661-3671.

Hayes BJ, Bowman PJ, Chamberlain AJ et al. A Validated Genome Wide Association Study to Breed Cattle Adapted to an Environment Altered by Climate Change // PLoS ONE. - 2009. - Vol. 4, Issue 8. - P. e6676.

Lemay DG, Lynn DJ, Martin WF et al. The bovine lactation genome: insights into the evolution of mammalian milk // Genome Biology - 2009. - Vol. 10. Is. 4. - Article R43.

Luikart G., England PR, Tallmon D. et al. The power and promise of genomics: from genotyping to genome typing // Nat. Rev.Genet. - 2003. - Vol. - P. 981-994.

Manel S., Schwartz MK, Luikart G et al. 2003 Landscape genetics: combining landscape ecology and population genetics // Trends Ecol. Evol. - 2003. - Vol. 18. - P. 189-197.

Medugorac I., Medugorac A., Russ I. et al. Genetic diversity of European cattle breeds // Molecular Ecology. - 2009. - Vol. 18. - P. 3394-3410.

Nosil P., Funk DJ, Ortiz-Barrientos D. Divergent selection and heterogeneous genomic divergence // Mol. Ecol. - 2009. - Vol.18. R. 375-402.

Tellam RL, Worley KC The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution // Science. - 2009. - Vol. 324. - P. 522-528.

The Bovine HapMap Consortium Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds // Science. - 2009. - Vol. 324.-P. 528-532.

Weller J., Ron M. Invited review: quantitative trait nucleotide determination in the era of genomic selection // J. Dairy Sci. - 2011. - Vol. 94. No. 3. - P. 1082-1090.

Wiener P., Edriss MA, Williams JL et al. Information content in genome-wide scans: concordance between patterns of genetic differentiation and linkage mapping associations // BMC Genomics. - 2011. - Vol. 12. - P. 65-74. 19. Nasibov FN, Pankratova AB, Samokhin AC, Khetagurova BT, Kosovsky G.Yu., Khilkevich SN, Belokoneva DA Endometralnye violations in cows and their normalization with the drug endotylte forte. // Agricultural Biology. - 2012. - № 2. - P. 60-63.

Trang Xuan Toan.Vu Chi Cuong, Tong Huu Hien, Luuquang Minh, Pham Thi Phoung Mai, Kosovsky G.Yu., Glazko VI, Giang Thi Than Nhan, Loung Nhan Tuan and Tran Xuan Hoan. Phylogenetic relationship of the H5N1 viruses isolated in Vietnam, 2012 based on sequencing of HA and NA gene segments. // Integral. - 2013. - №4 (72). -FROM. 4-8.

Kosovsky G.Yu., Sotnikova EA, Mudrik HH, Cuong VC, Toan TH, Hoan TX, Glazko V.I. Diagnosis of cattle leukemia using primers to genes gag and pol. // Veterinary Medicine. - 2013. - No. 8. - P. 58-61.

.Glazko VI, Kosovsky G.Yu. Structure of genes encoding enveloped proteins of avian influenza retroviruses and bovine leukemia. // Reports of the Russian Academy of Agricultural Sciences. - 2013. - No. 5. - P. 56-60.

Glazko TT, Kosovsky G.Yu., Glazko V.I. Biomarkers of genomic instability in agricultural animals. // News of the Timiryazev Agricultural Academy. - 2013. - No. 2. - P. 139147.

Kornienko EV, Kosovsky G.Yu., Glazko V.I. Problems of cloning of farm animals. // Agricultural Biology. -2014. - №2. Pp. 32-38

Kosovsky G.Yu. Noncanonical motifs of DNA (G4 quadruplexes) in the genes of proviral DNA of avian influenza retroviruses and bovine leukemia. // Bulletin of the Russian Academy of Agricultural Sciences. -2014. - №2. Pp. 41-46

Futochkina VA, Kolmychkova KI, Kosovsky G.Yu. Effect of organ extracts on human postnatal fibroblast cultures. // П conference of participants of the Russian biomarker consortium "BIOMARKERS 2013" February 19, 2013. - Moscow. - P. 37-38.

Sotnikova EA, Kosovsky G.Yu. Biomarkers of retroviral infection using the example of bovine leukemia virus // II conference of participants of the Russian biomarker consortium "BIOMARKERS 2013" February 19, 2013. - Moscow. - С. 35-36.

Kornienko EV, Kosovsky G.Yu. Biomarkers of embryonic stem cells. // П conference of participants of the Russian biomarker consortium "BIOMARKERS 2013" February 19, 2013. - Moscow. - P. 2627. Actual problems of intensive livestock development Kurdeko AP collection of scientific papers / Belarusian State Agricultural Academy. Gorki, 2009. Volume 1

Actual problems of intensive development of animal husbandry Materials of the XVII International Scientific and Practical Conference dedicated to the 80th anniversary of the formation of the Department of Zooghygiene, Ecology and Microbiology, UB BSAA / 2014.

DNA technology in the selection of agricultural animals. Yakovlev AF, Smagradov MG, Matyukov VS Achievements of science and technology of agroindustrial complex. 2011. № 8. With. 49-51.

Zinoviev NA, Ernst LK Problems of biotechnology and selection of farm animals. Moscow region: Publishing house of VGNII cattle breeding. 2006

Kuznetsov, V.M. Associations of blood groups with quantitative traits. / V.M. Kuznetsov // Mas and genomic selection. 2010. [Electronic resource] URL: http: www. vm- Kuznetsov.ru> files / etude / 13_blood_gs.pdf.

Mymrin, V.S. Results of genomic evaluation of bulls-producers, derived in Russia / VS Mymrin, S.V. Mymrin, OA Tkachuk // Zootechny. - 2014.-№5. -C.2-5.

Plemyashov, K. Genomic selection - the future of livestock / K. Plemyashov // Livestock breeding in Russia. - 2014 - №5. - С. 2-4.

Rukin, I.V. Genomic selection - the future in animal breeding / IVRukin, E.S.Pantyukh, D.S. Gruzdev // Zootechny. - 2013. - No. 7. - P. 8-9.

Smaragdov, M.G. Genomic selection of dairy cattle in the world. Five years of practical use. Smaragdov // Genetics. - 2013. - T.49. - No. 11 - P. 1251-1260.

Jackson DA, Symons RH, Berg P. // Proc Natl Acad Sci USA, 1972. - Vol. 69. N.10. 2904-2909.

Jackson DA, Symons RH, Berg P. // Proc Natl Acad Sci USA, 1972. - Vol. 69. 10. 2904-2909.

VanRaden, PM Genomic imputation and evaluation using high density Holstein genotypes / PMVanRaden, DJNull, M.Sargolzael et al. // J. Dairy Sci. - 2013. - V. 96. - P. 668-678.




DOI: http://dx.doi.org/10.52155/ijpsat.v17.1.1400

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